This software is for registering and fusing the datasets from two views. It was originally developed for OpenSPIM-like setups but works well for diSPIM data as well.

See homepage at http://fiji.sc/Multiview-Reconstruction.

As of April 2015 the MVR plugin allows for direct importing of Micro-Manager datasets. Previously the Micro-Manager plugin's export function was used (it is still required for MIPAV GenerateFusion).